Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918923.1_cds_XP_016468258.1_60918
CDS Infomation

[gene=LOC107790804] [db_xref=GeneID:107790804] [protein=phospholipase D delta-like] [protein_id=XP_016468258.1] [location=join(60509..61426,61576..61692,61812..62006,62435..62698,62781..62849,62999..63146,63410..63558,63652..64002,64314..64607)] [gbkey=CDS]
Sequence

ATGGCTGGAAAACATGGTATGGACATACCTGGAGGTTCAGTACTTCTGCACGGAGAACTG
GACTTGCGGGTTATCGAAGCAAAGTCACTTCCAAACATGGACATGGCATGTTGTTCCAAG
TTTAGTCCTTTTGGAACGCGAAAGGTTAAGAGCAAGGATACAGGGAATAAATCAGCAACT
CGTAAAATAATAGATACTAGTGACCCCTATGTGTCTGTATGTATAGGCGGGGCAAAAGTA
GCTAGAACAACAGTGATTCGCAACGATGAAAACCCCACATGGAATGAGCATGTACGCATA
CCAGTGGCTCACAAAGTTGACAAGGTAGAATTTTTTGTCAAGGACAATGATGGGGTAGGT
GCTGAACTGATTGGAAAGGTGGAAATACCTGCTGATAAAATTCATGTTGGTAAAGAAATA
AGTGGTTGGTTCCCTATTCTTGGATCTTCTGGGGATCCATTGAAAACTGGTGCTCAACTG
CATCTGTCAATCCAATACAAGCCAGTGGCAGAGAACCCTATATATAGAAATGGTGTTGGA
GGTGAGGCCAATAGAGTAGGAGTACCGCATACTTATTTTCCACTGCGAAAAGGAGGGAAT
GTTACTCTTTATCAGGATGCCCATGTACCTGATGCAACACTTCCTGAAATATTGCTAGAT
GATGGGAAGGTTTTTAATCATAACAAATGTTGGGAAGACATTTGTCATGCCATGTTGGAG
GCTAAGTATTTAATATATGTTGTTGGTTGGTCCGTATATCATCCTATACGGCTAGTAAGA
GAACCTACAAGGACGTTGCCGTCTGCAGGGGAACGAACACTTGGAGATTTGCTCAAGTAC
AAGTCACAAGAAGGAGTTCGCGTCATTCTGCTCATTTGGGATGATAAAACTTCAAATGAT
GATTTATTCCTCAAAACGGAAGGTGTAATGCAGACTCATGATGAAGAGACCAGAAAGTTT
TTTAAACACTCAAGTGTACACTGTGTGCTTTGTCCTCGTTCCGCCAGCAGTAAGCTTAGT
GTTTTGAAGAGACAGATTGTTGGAAGCCTTTTTACACATCATCAGAAATGTGTGCTTGTT
GACACAGAAGCACCTGGGAATGAACGGAAAATCACTGCTTTTATTGGTGGCCTGGATTTA
TGTGATGGCCGCTATGACACTCCCCAGCATAGACTGTTCAGCGATCTTGATACTGTCTTT
GGAAATGATGTTCATAATCCTACATTCACGACTACTTCAGGTGGCCCAAGAGAACCATGG
CATGATCTACACTGTAAAATTGAGGGTCCTGCTGCTTATGATGTTTTGACAAACTTCGAG
CAAAGATTTAACAAGGCCATTAAATGGCTCAAACTAAGAAAAGTCAAACAAGGATCTGAT
ACATTGCTTAAATTAGATCGAATAGCAGCAATTCGCATGCCTTCTGCTGGGCCAGATGGT
GACCGTGTGGTCCGTGTCACAAGTGAACAAGATCCAGAGAGTTGGCATGTGCAAGTATTT
CGATCAATTGATTCAGGATCAGTAAAAGGATTTCCAAAAGACGTTAAGGAAGCTGAGGCT
CAGAATCTTGCCAGTGGAAAAAATTTGAAGATAGAAAGAAGCATACATTTGGCTTATGTG
AAAGCAATTCGATCTGCCCAGCACTTTGTTTACGTAGAGAATCAGTATTTTCTTGGTTCT
GCATATAGCTGGCCATCTCACCGAAATTCAGGAGCTAATAACCTAGTCCCTATGGAAATA
GCTCTGAAAATTGCCAGAAAAATAGCAGCAAATGAACCTTTCGCAGCATACATTGTGGTT
CCAATGTGGCCTGAAGGTGTCCCAAGCAGTAAACCAGTCCAAGAAATTCTCTTCTGGCAG
AGCCAAACAATGGCTATGATGTACAAAATAGTGGCAGAGGCTCTAGATAAGGCAAGGGTT
TCTCAGTATTTTCATCCTCAGGATTACTTGAACTTCTACTGCCTGGGGAAGCGCGAGGTA
GCAAAGGGTAAAAGTGAGAAATCTGTGTCACAGGGATTGGCTCAGAAGTTTGGGAGATTT
ATGATATATGTACACTCAAAAGGAATGATAGTAGATGATGAGTATGTGTTGATGGGTTCT
GCAAATATCAACCAAAGATCTTTGAGTGGTTCTAGGGATACAGAAATTGCTATGGGAGCT
TATCAACCAAATTACACATGGGCAAAAAAAGATCGTCATCCACATGGCCAGGTCTATGGT
TATCGGATGTCTCTCTGGGCTGAGCATCTTGGAGTGATCGAGAATACCTTGACGGAGCCC
CAGACAGTGGAATGTGTTAGACGCGTTAATGAGATTGCGAGATACAACTGGAATGCATTT
TCAGGGGATGAGTACAAGAAGATGAAGGGGCATTTGATGCAATATCCAATTCAGGTTAGC
AAGAATGGAGATGTCACAACTATGCCTGGCTTTGAATGCTTTCCTGATGTTGGTGGTAAG
ATTCTAGGGGCACCTACAAATCTTCCTGATGCTCTTACCACTTAA

Peptide Sequence

PEP ID

XP_016468258.1
PEP Infomation

PREDICTED: phospholipase D delta-like [Nicotiana tabacum]
Sequence

MAGKHGMDIPGGSVLLHGELDLRVIEAKSLPNMDMACCSKFSPFGTRKVKSKDTGNKSAT
RKIIDTSDPYVSVCIGGAKVARTTVIRNDENPTWNEHVRIPVAHKVDKVEFFVKDNDGVG
AELIGKVEIPADKIHVGKEISGWFPILGSSGDPLKTGAQLHLSIQYKPVAENPIYRNGVG
GEANRVGVPHTYFPLRKGGNVTLYQDAHVPDATLPEILLDDGKVFNHNKCWEDICHAMLE
AKYLIYVVGWSVYHPIRLVREPTRTLPSAGERTLGDLLKYKSQEGVRVILLIWDDKTSND
DLFLKTEGVMQTHDEETRKFFKHSSVHCVLCPRSASSKLSVLKRQIVGSLFTHHQKCVLV
DTEAPGNERKITAFIGGLDLCDGRYDTPQHRLFSDLDTVFGNDVHNPTFTTTSGGPREPW
HDLHCKIEGPAAYDVLTNFEQRFNKAIKWLKLRKVKQGSDTLLKLDRIAAIRMPSAGPDG
DRVVRVTSEQDPESWHVQVFRSIDSGSVKGFPKDVKEAEAQNLASGKNLKIERSIHLAYV
KAIRSAQHFVYVENQYFLGSAYSWPSHRNSGANNLVPMEIALKIARKIAANEPFAAYIVV
PMWPEGVPSSKPVQEILFWQSQTMAMMYKIVAEALDKARVSQYFHPQDYLNFYCLGKREV
AKGKSEKSVSQGLAQKFGRFMIYVHSKGMIVDDEYVLMGSANINQRSLSGSRDTEIAMGA
YQPNYTWAKKDRHPHGQVYGYRMSLWAEHLGVIENTLTEPQTVECVRRVNEIARYNWNAF
SGDEYKKMKGHLMQYPIQVSKNGDVTTMPGFECFPDVGGKILGAPTNLPDALTT

Transcript Sequence

Gene sequence data has not been registered.